Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQKNTLLEVADNSGAREVLCIGLLGG--RKSASIGDTIVVSTKSVNPKGKVEKGKVYRAVVVRVKNCIRKSDNSVIRFSSNAVVLVNNQGE-PLGTRVFGPV-KKLPSGSFMKIMSLAVEVL
3J5L Chain:K ((1-122))
MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGPVTRELRSEKFMKIISLAPEV-
General information:
TITO was launched using:
RESULT:
Template:
3J5L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71814 for 920 contacts (-78.1/contact) +
2D Compatibility (PS) -13045 + (NN) -5941 + (LL) 176
1D Compatibility (HY) -13600 + (ID) 3550
Total energy: -107774.0 ( -117.15 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_3J5L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J5L-query.scw
PDB file :
Tito_Scwrl_3J5L.pdb
: