Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFVPKKSKYRKVFKGRIKGNTKGGSTLSFGDYGLKTIEAGRVQSKHIETVRRVISRTLKRSGKIWIRIFPDTPISKKPTDVRMGKGKGSVEFWVFKAKPGRVLFEISSDVPMHLAKLALEKAMAKLPVKCKFISNYS
4CSU Chain:M ((1-132))
MLQPKRTKFRKMHKGRNRGLAQG-TDVSFGSFGLKAVGRGRLTARQIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVLYEMDG-VPEELAREAFKLAAAKLPIKTTFVTKTV
General information:
TITO was launched using:
RESULT:
Template:
4CSU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41604 for 910 contacts (-45.7/contact) +
2D Compatibility (PS) -14192 + (NN) -6471 + (LL) -248
1D Compatibility (HY) -10400 + (ID) 3400
Total energy: -76315.0 ( -83.86 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_4CSU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CSU-query.scw
PDB file :
Tito_Scwrl_4CSU.pdb
: