Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGIKFLNPVTPSSRGTVLVSKIGLSRGKPEKSLAFGKKSSGGRNNNGRITIRHKGGGHKKKYRIIDFKRNRND-QGVVEKIEYDPNRSGFLALVSYKCDDTKSYILAPQGIKPGDIVMSGSGIDILPGNCLPLKGIPIGSFVHGVELKPGSGAVIARAAGCYAQVVGRDGNYVLLRLRSGQVRLVLSSCKATIGVVSNPDRKNRKLGKAGRSRWLGVRPTVRGVAMNPVDHPHGGGEGKTSGGRHPVTPWGVATKGKKTRKKNKFSDKYIKQLKG
487D Chain:I ((1-135))
------------------------------------------------------------QYRIIDFKRDKDGIPGRVATIEYDPNRSANIALINY-ADGEKRYIIAPKNLKVGMEIMSGPDADIKIGNALPLENIPVGTLVHNIELKPGRGGQLVRAAGTSAQVLGKEGKYVIVRLASGEVRMILGKCRATVGEV-------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
487D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81247 for 1049 contacts (-77.5/contact) +
2D Compatibility (PS) -14991 + (NN) -10927 + (LL) 2944
1D Compatibility (HY) -12000 + (ID) 3650
Total energy: -119871.0 ( -114.27 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_487D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-487D-query.scw
PDB file :
Tito_Scwrl_487D.pdb
: