Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDIENNLQDLKRKFNYIERKLENPTNLS-QKEFINLSKEYSELRPIIKIINEYDTLKKEILDLEEIIKDENSEYDIKELAKEEFFEKQKVLLPQVKAKLKLALLPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISSTGIGGYKEASALINGTEVFARLKFESGVHRVQRVPETESSGRLHTSAATVAILPEVEEV-DFKIEEKDLRIDVYRSSGPGGQSVNTTDSAVRVTHLPTEMVVIQQDEKSQHKNKAKALKVLRARLYEIERQKKEIERSTMRKSQIGSGDRSERIRTYNFPQSRITDHRINLTSHQLEQIIKEGELDEFIEVLISRNEAERLAGES |
2B3T Chain:B ((7-354)) | ----AKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQLSDVSRCFTDWQQV----------------------------------------QQLQVLLLPKDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDVNPADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQ------RRN-------SDRNRTYNFPQGRVTDHRINLTLYRLDEVM-EGKLDMLIEPIIQEHQADQLA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B3T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61558 for 2146 contacts (-28.7/contact) +
2D Compatibility (PS) -32035 + (NN) -16257 + (LL) 4816
1D Compatibility (HY) -22400 + (ID) 8050
Total energy: -135484.0 ( -63.13 by residue)
QMean score : 0.391
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