Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSEKIELIFEKLKQSNPIPKIELSYTNHFTLLVAIVLSARTTDVSVNKITKELFSIANTPEKMLNLGQSELKKHISSIGLYNSKAKNIIELSRILVERHTSKVPTNFDDLVSLPGVGRKSANVFLNSGLGIPTLAVDTHVFRVSNKIGLVKEKDVFKTEKSLLNVVPKKYLLYAHHWLVLHGRYVCKAQKPSCKTCIIHDLCEFECKRYKV
2ABK Chain:A ((1-210))
MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANTPAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLILHGRYTCIARKPRCGSCIIEDLCEYKEKVDI-
General information:
TITO was launched using:
RESULT:
Template:
2ABK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137123 for 1649 contacts (-83.2/contact) +
2D Compatibility (PS) -21608 + (NN) -8920 + (LL) 64
1D Compatibility (HY) -20000 + (ID) 5400
Total energy: -192987.0 ( -117.03 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_2ABK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ABK-query.scw
PDB file :
Tito_Scwrl_2ABK.pdb
: