Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLQSIIKELQDFWIGEGCTILHPYTSEVGAGTLHPATIMSAIDVKPTKIAYLQPVVRPADGRYGDNPNRLYQHHQYQVIIKPSGNNLQDVYLSSLRALGISTEKYDIKFIEDDWENPSVGASGLGWEVTCNGMEVTQLTYIQQIGSINCRIIPGEVAYGLERLAMCIQGVNNVYDIIWNDN---GITYGDIFKQREYELSYLALDYYNTEVVQQQFEDTEKLCKFLIEKELPVAAYDQCVKTSHLLNLLDARGILGVNERTAYIGRVRELTKKCCELYMSK
3RF1 Chain:A ((25-306))MTFSQMILNLQNYWQEQGCAIMQPYDMPAGAGTFHPATFLRSLGKKPWAAAYVAPSRRPTDGRYGENPNRLGAYYQFQVLIKPSPDNIQELYLKSLENLGFDLKSHDIRFVEDNWESPSLGAWGLGWEVWLDGMEVTQFTYFQQVGGIAVDLVSAEITYGLERIAMYLQNVDNVYDIVWSEFNGEKIKYADVHKQSEYEFSKYNFEVSDVKILNEQFENSYKECKNILEQGLALPAYDYCMLAAHTFNLLDARGAISVAQRQDYMLKIRELSKNCAEIYKKN


General information:
TITO was launched using:
RESULT:

Template: 3RF1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143853 for 2301 contacts (-62.5/contact) +
2D Compatibility (PS) -30355 + (NN) -13074 + (LL) 0
1D Compatibility (HY) -30400 + (ID) 6700
Total energy: -224382.0 ( -97.51 by residue)
QMean score : 0.546

(partial model without unconserved sides chains):
PDB file : Tito_3RF1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RF1-query.scw
PDB file : Tito_Scwrl_3RF1.pdb: