Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTLVNILFIMIPLLFSVAYLVYFERKVIGAIQLRHGPSVVGPFGLLQPFADAIKLLVKEPIIPFRANTILFIMAPMLTFILALIVWAVIPFGAEVITENGQQIVIPKVIANVNIGVLYVLAISSLGIYGIIVAGWSSNSNYAFLGSIRSAAQMISYEVSMGLIVATVVITTGTLNLGEMVATKHSMPFWIDLLMMPIGVVFFISLLAETNRHPFDLPEAEAELVSGYNVEYSSMPFALFFLGEYANMILGSAMMTIFFLGGWYPPLKLSLLYKIPGLIWFVLKIVLLLFIFVWTRATIPRYRYDQLMRLGWKVFLPISVLWVILISGVLLFTGNLPGRGL |
| 4HE8 Chain:H ((15-325)) | ----LKALLVVVGLLTAFAFMTLIERRLLA--------------------------------------RFLFVLAPLISVVFALLAFGLIPFGPPGSFFGYQPWVI-----NLDLGILYLFAVSELAVYGIFLSGWASGSKYSLLGSLRSSASLISYELGLGLALLAPVLLVGSLNLNDIVNWQKEHG-WLFLYAFPAFLVYLIASMAEAART------------------YSSIKWALFQMAEYIHFITASALIPTLFLGGWTMP-----VLEVPYL-WMFLKIAFFLFFFIWIRATWFRLRYDQLLRFGWGFLFPLALLWFLVTALVVALDLPRTYLLY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -292435 for 2010 contacts (-145.5/contact) +
2D Compatibility (PS) -26376 + (NN) -8716 + (LL) 5308
1D Compatibility (HY) -43200 + (ID) 5100
Total energy: -370519.0 ( -184.34 by residue)
QMean score : 0.260
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