Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKITINSQECEVKPGLTIIQACETVGVEIPRFCYHERLAIAGNCRMCLVEVKGGPPKPVASCAMPVAEGMVIYTDTPKVKKAREGVLEFLLINHPLDCPICDQGGECDLQDITVVYGKGNSRFDEHKRAIPKKHFGQLIEAAMNRCIHCTRCIRFLSDVAGTNELGGIGRGENMEISTYIKKHISSELSGNIIDLCPVGALTSKPYSFTARPWELSHCETIDVLDAVGSSIRVDYRGPEVMRILPRLNEEVNEEWISDKTRFAYDG-LKVQRLDQPYIKR--DNRLVPADWNEALTVAAKKLRS----TKPNKIAAIAGDLADCESMLLLKEIMQ-KLGSSNIDCRQDGAKLIP------NNRGSYVFNTTIEGIENVDLCLLINTNPKVEAPIINARIRKRYL--QGNFPIASIGPD-IEYLYHVEKL-----GNNPGVLNEIAKGN--H---------------------------------------------------KFCKLLSAAQNPMLIIGQDALTRDDSES-ILALAGAIAEK-FNMVRNDWNGFNVLHKAAARVGGLD-IGFVPKKD------------------------------GKNINQILEQAESGEIEVVYLLGAD-EINT--------LKLEN-AFVIYQGHHGDR-GAHMADIILPGAAYTEKYATYVNTEGRVQRAKLAVSPPGEAKEDWSIIKNLSQYLGLS---LPYDSLFDVRKKLDAIGPQFRNTDQVVKNKWMSITCNEIKLSSVPFFLKECNFYMTDSISRASKIMANCTKAFYEHAS |
| 2NAP Chain:A ((4-525)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RPEKWVKGVCRYCGTGCGVLVGVKDGKAVAIQGNPNN-HNAGLLCLKGSLLIPVLNSKERVTQPLVRRHKGGKLEPVSWDEALDLMASRFRSSIDMYGPNSVAWYGSGQCLTEESYVANKIFKGGFGTNNVDGNPRLCMASAVGGYVTSFGKDE-PMGTYADIDQATCFFIIGSNTSEAHPVLFRRIARRKQVEPG-VKIIVADPRRTNTSRIADMHVAFRPGTDLAFMHSMAWVIINEELDNPRFWQRYVNFMDAEGKPSDFEGYKAFLENYRPEKVAEICRVPVEQIYGAARAFAESAATMSLWCMGINQRVQGVFANNLI-HNLHLITGQIC-RPGATSFSLTGQPNACGGVRDGGALSHLLPAGRAIPNAKHRAEMEKLWGLPEGRIAPEPGYHTVALFEALGRGDVKCMIICETNPAHTLPNLNKVHKAMSHPESFIVCIEAFPDAVTLEYADLVLPPAFWCERDGVYGCGERRYSLTEKAVDPPGQCRPTVNTLVEFARRAGVDPQLVNFRNAEDVWNEWRMVSKGTTYDFWGMTRERLRKESGLIWPCPSEDHPGTSLRYVRGQDPCVPADHPDRFFFYGKPDG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154340 for 3572 contacts (-43.2/contact) +
2D Compatibility (PS) -42740 + (NN) -14464 + (LL) 13464
1D Compatibility (HY) -10800 + (ID) 3400
Total energy: -212280.0 ( -59.43 by residue)
QMean score : 0.463
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