Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIHVAIYMLLLCMSAMLYRIAKLSDIYNKAL-----AFNHFSTQVILLITAVSIILDS-FFLVD-IALLYASVSFISTIALMRLMLL-----
2P5T Chain:A ((67-158))
LNPVEDYELTLKIEIVKERGANLLSRLYRYQDSQGISIDDESNPWILMSDDLSDLIHTNIYLVETFDEIERYSGYLDGIERMLEISEKRMVA
General information:
TITO was launched using:
RESULT:
Template:
2P5T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84700 for 468 contacts (-181.0/contact) +
2D Compatibility (PS) -8799 + (NN) -7052 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -104501.0 ( -223.29 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_2P5T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P5T-query.scw
PDB file :
Tito_Scwrl_2P5T.pdb
: