Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLADKPVLSHAVKKLLTNQYIDYVRVIINRNHEDFYRETIDSLHNYYLSEAVHSFQYVTLKSRKKEEWIPVSSTGMKGRVDTKLLSPVYGGKSRQNSVKLGLESLQKINPDFVVIHDACRPFVSNTLINNLARSMINNQHTGVVPAIEVEDTISLVNDDLIESTIPRERLRAIQTPQIFNFKELLSYHRSNKEFTDDSSLMVEHKKRVVVTRGEKINFKLTTKEDINMAKLLLDEPKYRVGTGYDIHRFIKAQGKAKSFIKICGVEIEYDMKIEAHSDGDVAIHAVVDAILGALGCGDIGAHFPPSFPEWKDRNSSHFLDFAAKKAKEKGYSVSNLDITIVCEEPKISPYKVAMKKFISKTLEIDSEFVNVKATTTEKLGSIGRNEGILAHASVLLYKIAPLHN |
1W55 Chain:A ((27-368)) | -RLGNDPLWLYATKNLSSFYPFKKIVVTSSNIT--YMKK-F-----------------------------------------TKNYEFIEGGDTRAESLKKALELID---SEFVMVSDVARVLVSKNLFDRLIENLD--KADCITPALKVADTTLFDN-----EALQREKIKLIQTPQISKTKLLKKALDQNLEFTDDSTAIAAMGGKIWFVEGEENARKLTFKEDLKKLDLPTPSFEIFTGNGFDVHEFGEN-----RPLLLAGVQIHPTMGLKAHSDGDVLAHSLTDAILGAAGLGDIGELYPDTDMKFKNANSMELLKQAYDKVREIGFELINIDICVMAQSPKLKDFKQAMQSNIAHTLDLDEFRINVKATTTEKLGFIGRKEGMAVLSSVNLKYFDWTR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W55.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178267 for 2694 contacts (-66.2/contact) +
2D Compatibility (PS) -37019 + (NN) -21971 + (LL) 3656
1D Compatibility (HY) -16000 + (ID) 6150
Total energy: -255751.0 ( -94.93 by residue)
QMean score : 0.405
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