Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNQTVRGTKDLLFDEWYRFKYIQQIANRISSLYGFLPAQTPIFEYTEVFMKTLGDGSDIINKEMYTFYDKGGKSITLRPEFTAAIVRLLVEKKL--QIPIKLFSTGPAFRYERPQKGRQRQFHQINFEVFGVENPKADIELISLAHHLLTEFNISKNVRLEINSLGDSETIAKYKEVLIPYFKKFQNDLSEDSQNRLTKNPLRILDSKDEKDKLIISDAPKISDYYTRESSDFFEQILNGLTALNIPCTVNSKLVRGLDYYCHTVFEFVIEDFGAQGAVFAGGRYDNLVSSVGGKYTPAIGFAGGIERIMELINYSMK-----GDRPICLVPIGREAEEHALTLANELRRN--GLYVIYEYNG-ALKNRMKKASQANAKAALIFGNEELGSKTLKIKNMDTGEEKIIAYGNIMENIHQTLLV |
| 1HTT Chain:A ((3-422)) | -NIQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARAN---------------------------------------------------YLDEESREHFAGLCKLLESAGIAYTVNQRLVRGLDYYNRTVFEWVTN----QGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNPEFKADPVVDIYLVASGADTQSAAMALAERLRDELPGVKLMTNHGGGNFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLRTLLG- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1HTT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -208472 for 2717 contacts (-76.7/contact) +
2D Compatibility (PS) -38949 + (NN) -15969 + (LL) 3256
1D Compatibility (HY) -25600 + (ID) 7050
Total energy: -292784.0 ( -107.76 by residue)
QMean score : 0.534
|
|
|