Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTRFAPSPTGYLHVGNARTALVCWMYTRSQNGKFLLRFDDTDLQRSDVKHIDSIVQDLRWICIDWDV---------IFKQSERFKHYNEVFLQLITKGHIYACYETKEELDIKRKLQLKHGLPPVYDRSALLL--TEQEKFCYEQEGRKPHFRFKLDRNEVVKWNDEVKGEINIATSSISDPVVKREDGIYTYMLPSVIDDVDFNVTHVIRGEDHVTNTAVQIQMIQALEAKVPVFAHLPLLHFDDS-KISKRKGGLDIKSIKENEIEPMALASYLIKLGTSDPI-EAYVNMQSLIDSFDIKKFGSASAQFNLSEIHKLNSKVLQQMPFEMVKERLSQ----------IGVNSPEFWYFIRNNIEKFSEVAEWWQICKSNIEPV-VL--DKEFIKIVLDALPQGDCNENTLSEWVKAIQQTVDIKLKDLFMQLRLALTGAKTGPELAKLLIFIGKENIIARLKKY |
2O5R Chain:A ((14-478)) | VRVRFAPSPTGFLHVGGARTALFNFLFARKEKGKFILRIEDTDLERSEREYEEKLMESLRWLGLLWDEGPDVGGDHGPYRQSERVEIYREHAERLVKEGKAYYVYAYPEEIEEMREKLLSEGKAPHYSQEMFEKFDTPERRREYEEKGLRPAVFFKMPR-KDYVLNDVVKGEVVFKTGAIGDFVIMRSNGLPTYNFACVVDDMLMEITHVIRGDDHLSNTLRQLALYEAFEKAPPVFAHVSTILGPDGKKLSKRHGATSVEAFRDMGYLPEALVNYLALLGWSHPEGKELLTLEELISSFSLDRLSPNPAIFDPQKLKWMNGYYLRNMPIEKLAELAKPFFEKAGIKIIDEEYFKKVLEITKERVEVLSEFPEESRFFFEDPAPVEIPEEMKEVFSQLKEELQNVRWTMEEITPVFKKVLKQHGVKPKEFYMTLRRVLTGREEGPELVNIIPLLGKEIFLRRIERS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O5R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240037 for 3325 contacts (-72.2/contact) +
2D Compatibility (PS) -46420 + (NN) -17370 + (LL) -80
1D Compatibility (HY) -29600 + (ID) 7350
Total energy: -340857.0 ( -102.51 by residue)
QMean score : 0.520
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