Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVKKNRINEFITAKEVRLVDHNGEMVGVVSIGRALTFAQNVGLDLVEVAPDSIPPVCKILDYSKQKYDAKKKASEAKKKQKTLTIKEIKLGPNIGDHDYETKLRHARDFLTHGHKIKVTMKFKGRELINTEVGLEKLERLIRDTEDIAKIESAPKREGNQYFLALTTK
1TIG Chain:A ((83-168))
-----------------------------------------------------------------------------------INVKEVRLSPTIEEHDFNTKLRNARKFLEKGDKVKATIRFKGRAITHKEIGQRVLDRLSEACADIAVVETAPKMDGRNMFLVLAPK
General information:
TITO was launched using:
RESULT:
Template:
1TIG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24184 for 591 contacts (-40.9/contact) +
2D Compatibility (PS) -9341 + (NN) -3451 + (LL) 6160
1D Compatibility (HY) -7200 + (ID) 2000
Total energy: -40016.0 ( -67.71 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_1TIG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TIG-query.scw
PDB file :
Tito_Scwrl_1TIG.pdb
: