Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLAKGKEMGKLEGKIALIAGASGGMGSAVAKRFVREGAYVILISRSIDNLKQLYDEIEKLDEFKEGSVKLIQLDLLDFENVKILANMIESLKLSESGALDILVACTGILGKLNLVHDCELEELQNVMNTNFTANWYLLKNLDPVLKKSNSGRVIFMTSEVTLSPSSYPYWVPYAASKAALEIMVKIYASETKHTKLCVNAVYSEGPVDSEMYKQAFPGKDISELILPNKLTDKFVELASEDCSISGQVLPLSKSLE
4Z0T Chain:A ((13-240))
-----------LTGRLALVTGASRGIGYFLSLELAKRGAHVIAVARTVGGLEELDDEIRKLGS----SATLVPLDITDMEALDRLGGTIHE----RWGKLDILVANAGILGTISPIGHVEAKTFEKVMNINVTSVWRLIRSVDPLLRASDAGRAIMLSSGV--AHSCRAFWGPYAASKAAVEVMARCWAEETKKMKLKINSV-NPGATRTAMRAQAMPGEDPETLPTPQSVAEKIVKLADPKLEVTGKLFDVRQDRF
General information:
TITO was launched using:
RESULT:
Template:
4Z0T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -157150 for 1946 contacts (-80.8/contact) +
2D Compatibility (PS) -24182 + (NN) -8817 + (LL) 1448
1D Compatibility (HY) -18400 + (ID) 4550
Total energy: -211651.0 ( -108.76 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_4Z0T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4Z0T-query.scw
PDB file :
Tito_Scwrl_4Z0T.pdb
: