Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTINWQAKDPEGNSINCSMTVKVGSGGIQSATGGFGVS----KFKSPLPEGKKSEILKLVEQNKEVFISGKTLYKAFTDVGQSVDD
3OT5 Chain:A ((297-352))
------------NFLRKSYLVFTDSGGVQEEAPGMGVPVLVLRDTTERPEGIEAGTLKLIGTNKENLIKEALDLLDNKESHDKMAQ
General information:
TITO was launched using:
RESULT:
Template:
3OT5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4694 for 286 contacts (-16.4/contact) +
2D Compatibility (PS) -5176 + (NN) 2107 + (LL) 584
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: -10179.0 ( -35.59 by residue)
QMean score : 0.105
(partial model without unconserved sides chains):
PDB file :
Tito_3OT5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OT5-query.scw
PDB file :
Tito_Scwrl_3OT5.pdb
: