Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNSQLNYPITIELDDIKDTKLKLIKIVARLINKRYRTQKKAAIALKIDQPKVSQINKSKIEGFSLEYLLNLLVALDQDINMKIKHNSQHNIQ
2O38 Chain:A ((35-102))
-----------------RQTKLRLAYALNAVIDRARLSQAAAAARLGINQPKVSALRNYKLEGFSVERLMTLLNALDQDVEIVIRKKPRSRAA
General information:
TITO was launched using:
RESULT:
Template:
2O38.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43252 for 424 contacts (-102.0/contact) +
2D Compatibility (PS) -7249 + (NN) -3661 + (LL) 1180
1D Compatibility (HY) -5600 + (ID) 1500
Total energy: -60082.0 ( -141.70 by residue)
QMean score : 0.662
(partial model without unconserved sides chains):
PDB file :
Tito_2O38.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O38-query.scw
PDB file :
Tito_Scwrl_2O38.pdb
: