Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDKKTRIESDSLGEVKVPSEHYWGAQTQRSLENFKIG--MEKMPEPIIKALAMVKLAAARVNVKHGTIDEKVGNAICVAAKEIIDGKFNNEFPLVVWQTGSGTQTNMNINEVISNRAIEILGSNLGSKFPVHPNDHVNYGQSSNDTFPTAMHIAAAKQINHSLIPNLEVLHKALNDKVQEFKNIIKVGRTHLQDATPLTLGQEFSGYAVQIKKGIERIKSTLSNLYELAQGGTAVGTGLNTKEGFAEDFAKEVAEITNLPFTSADNKFEALAANDALVELSGTLNTVAVSLMKIASDIRLLGSGPRCGIGEITLPENEPGSSIMPGKVNPTQCEAVTMVCAQVMGNHVAVTVSGSNGHFELNVFKPVIIYNVLQSIRLLADASLNFTEKCVIGIKANEKRIKDLLNQSLMLVTILNTHIGYDNAAKIAKLAYKENITLKEAAVKLKLLTEQEFERIVKPEKFINH |
3E04 Chain:D ((31-487)) | -----RIEYDTFGELKVPNDKYYGAQTVRSTMNFKIGGVTERMPTPVIKAFGILKRAAAEVNQDYG-LDPKIANAIMKAADEVAEGKLNDHFPLVVWQTGSGTQTNMNVNEVISNRAIEMLGGELGSKIPVHPNDHVNKSQSSNDTFPTAMHIAAAIEVHEVLLPGLQKLHDALDAKSKEFAQIIKIGRTHTQDAVPLTLGQEFSGYVQQVKYAMTRIKAAMPRIYELAAGGTAVGTGLNTRIGFAEKVAAKVAALTGLPFVTAPNKFEALAAHDALVELSGAMNTTACSLMKIANDIRFLGSGPRSGLGELILPENEPG---MPGKVNPTQCEAMTMVAAQVMGNHVAVTVGGSNGHFELNVFKPMMIKNVLHSARLLGDASVSFTENCVVGIQANTERINKLMNESLMLVTALNPHIGYDKAAKIAKTAHKNGSTLKETAIELGYLTAEQFDEWVKPKDMLGP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3E04.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -224343 for 3969 contacts (-56.5/contact) +
2D Compatibility (PS) -48848 + (NN) -21386 + (LL) 512
1D Compatibility (HY) -45600 + (ID) 15400
Total energy: -355065.0 ( -89.46 by residue)
QMean score : 0.558
|
|
|