Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSQSPKRMYGTGNNFVII----DSRSINNLNWNYREIANQN---GCDQIIVITNSSAADCFMHIYNADGGEVEMCGNAARCVGYLIMSEKSTEYA--TIELVNKRILECFKVGGRSI---KVNMGKPLFKWHEIPLSAKCD-PLHLPIELEMLKDP-----VAVNIGNPHMVFFVDNISEIPLQSLGPKLEKHTLFPKKVNVNIAQVEKSGEISLRVWERGTGITASCGSAACAALIASVLRGYLIT-RQTSVNLPGGKLLIEWPD--NIFMTGDIGFL |
| 2OTN Chain:A ((1-272)) | MSQFSFTKMHGLGNSYIYVNMFEEQIPEEDLALVAEKVSNINTGIGADGMILICPSDVAPVKMRMFNNDGSEGKSCGNGLRCVAKYAYEHKLVEDTVFTIETLAGIVTAEVTVEEGKVTLAKIDMGAPRLTRAEIPMLGEGETPF---IRENFLYNNHRYAFTAVSMGNPHAVIFVDDVEQAPLTTLGPVLETHEMFPERVNVEFIEILNEEEMNFRVWERGSGVTQACGTGACAAVVASILNGKMERGKEITVHLAGGDLMIAWTEEGNVLMKGPAEVI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OTN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191862 for 2037 contacts (-94.2/contact) +
2D Compatibility (PS) -27810 + (NN) -7842 + (LL) 80
1D Compatibility (HY) -20800 + (ID) 4750
Total energy: -252984.0 ( -124.19 by residue)
QMean score : 0.467
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