Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MREKINKYKSLEANTVINKKEELKTNTRKIVGTNVERIRYKYETGCN---------FRHSDIEMKWLRKNPKIPNFKISSC
2J0U Chain:A ((190-269))
--EMTNKFMT-DPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDITQAVIFCNTKRKVDWLTEKMREANFTVSSM
General information:
TITO was launched using:
RESULT:
Template:
2J0U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5482 for 278 contacts (19.7/contact) +
2D Compatibility (PS) -7004 + (NN) 2152 + (LL) 484
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -3886.0 ( -13.98 by residue)
QMean score : 0.314
(partial model without unconserved sides chains):
PDB file :
Tito_2J0U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J0U-query.scw
PDB file :
Tito_Scwrl_2J0U.pdb
: