Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVRGSEYYNTGSTNIEGKYASMIRGSVRHSLQLNHTYEEMSSQK----AGTQFAYNKHIYEKIDGFEIMIHSTVATLA
1VTN Chain:C ((47-86))
----------------------WQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFKLA
General information:
TITO was launched using:
RESULT:
Template:
1VTN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2515 for 147 contacts (-17.1/contact) +
2D Compatibility (PS) -3512 + (NN) 2184 + (LL) 948
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -5695.0 ( -38.74 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_1VTN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1VTN-query.scw
PDB file :
Tito_Scwrl_1VTN.pdb
: