Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVKIRLARFGAKKRPFYRIVVADSRAPRDGRFIERIGQYDPMLSKDNKNCVVVKADRLKYWLNVGAQASERVLWFIKK-GIITLEAEKKKVETKKAEIKKVKEQEV
1HNZ Chain:P ((2-84))
--VKIRLARFGSKHNPHYRIVVTDARRKRDGKYIEKIGYYDP--RKTTPDWLKVDVERARYWLSVGAQPTDTARRLLRQAGVFRQEAREGA----------------
General information:
TITO was launched using:
RESULT:
Template:
1HNZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60178 for 548 contacts (-109.8/contact) +
2D Compatibility (PS) -8355 + (NN) -2418 + (LL) 2344
1D Compatibility (HY) -6400 + (ID) 2050
Total energy: -77057.0 ( -140.61 by residue)
QMean score : 0.598
(partial model without unconserved sides chains):
PDB file :
Tito_1HNZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HNZ-query.scw
PDB file :
Tito_Scwrl_1HNZ.pdb
: