Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGVVFSGTQPSGVLHLGNYLGAIKQWVTLQDKYKSIFCIVDLYAITANKLSASELKSNIFKTAAAYIACGIDPEKSIIFNQSTISSHTELSWLLGCYTPVGWLNRMTQFKDKAGSDKQKASLGLYSYPVLMAADILLYRTKYVPVGDDQKQHLELARDIALAFNNHYKLGHFVIPEILVLDHASRIMSLRDGTSKMSKSPPSEYSCINLDDTDDLIVKKVGKAKTDS--ILGFDFATLKCRPEISNLINIYSVLSNLDVDKVCEEMNKYDMQHFKGELADLIISVISPIREEINDLLKDQSHLYRVLKKGTEKAAEIVGHNIKEIKNIIGFVQ |
3FHJ Chain:A ((3-324)) | ---TIFSGIQ-----TIGNYIGALRQFVELQHEYNCYFCIVDQHAITVWQ-DPHELRQNIRRLAALYLAVGIDPTQATLFIQSEVPAHAQAAWMLQCIVYIGELERMTQ-----------VSAGLLTYPPLMAADILLYNTDIVPVGEDQKQHIELTRDLAERFNKRY----FTIPEARIPKVGARIMSLVDPTKKMSKSDPNPKAYITLLDDAKTIEKKIKS----SEGTIRY--------PGISNLLNIYSTLSGQSIEELERQYEGKGYGVFKADLAQVVIETLRPIQERYHHWMESE-ELDRVLDEGAEKANRVASEMVRKMEQAMGLGR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -229435 for 2299 contacts (-99.8/contact) +
2D Compatibility (PS) -30786 + (NN) -11900 + (LL) 1508
1D Compatibility (HY) -26400 + (ID) 6550
Total energy: -303563.0 ( -132.04 by residue)
QMean score : 0.564
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