Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIADRKRSVKQKSDKNNLVGNLDIIKTAGEISLQKGLDFEVIMKALESAIEAVAYQKYGSKSKVVVNIDRSTGEVISYRELKVVDDEPNGEEHNGYGSITLTQAKLIKEDAKVGDTINELLSLNTDLASARIAQQRIAQVIKYEELKKQYEEFKDKVGEIRYGIVKQVEYSDLIIDINGTRAYLPLRNLIGGELFREGDKIKAYIQTVKRSDDGRQIILSRASEGFLEALLSQEIPEIADGLVTVKGIARDAGSRSKVAVFSPDKNIDPVGACVGVKGERIKAIIHELNGEKIDVVHYFSDLGQFVIKAITPAEVSKVIIDESENCVELIVAEDQLSLAIGKKGQNVRLASELIGWKIEILSTQQESERRNRELSQCSALFAEALNLEEIMGQLLVTEGFSSVEDIS---NASIKELASIEGFNEDIASELRNRANRYLKAENDRKIEELKSLGMESDVINLPLSIDDKIALSEHGIKTLENIADLSSYEFCSILSSSASDKENLKNTVNSIIMEARKKLGVI |
4MTN Chain:A ((5-392)) | -------------------GN-EVLRIVDSIHRDKSIDKEIVFEGVEQAILSAARKHFGEEEVIEVHIDRTSGQ-----------------------PMVKTNGREIDRD-ELGDILGRI--------SAQT-KQVMIQKIREAERDTLFDEYAQLRGQIVSGTVTRNEGSAITVNIGKAEAILPRSEMIPGESHRPNERIRAVVLEVKKMGPRVRVVLSRAHPDFVRRLLELEIPEVNERIIEIRSLAREAGYRTKVAVSCADSNIDPVGACVGVRGARIRNVGEELGGERIEVVRWNDSLQVLVPNAMQPSEVEDVILCPMLGRVLVLVRDDQLSLAIGKRGQNVRLASKLVGWDIDVMT----REELDQQLDQAVVAYSQIPGVSEELAEGLVSQGFLSFEDLSVIEPDELMEMGSLTQEQADVIVEYAERESERIEKEQDLRRATEKAERQSQE----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MTN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156356 for 2886 contacts (-54.2/contact) +
2D Compatibility (PS) -42252 + (NN) -19036 + (LL) 7676
1D Compatibility (HY) -27200 + (ID) 6900
Total energy: -244068.0 ( -84.57 by residue)
QMean score : 0.536
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