Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNRSTDTKRKEMIELKGPEICTDRSRENLIVCLHGRGSSGNNFVHLAKVMSKSLPNSCFVAPNAPSK-REIGNGYQWFS---LEDRSEEVLYNGVKNAASIVNHFIDTKLKEFSLKDTQLSLVGFSQGAMLAIHTALTRPQCCASVVAYSGKFLSPSRVAPKIKSRPNVCVIHGDADNVVPFSFFDLTVKALKENGVNVEGYPIRTLGHLINKEGIKLGVEFIKKNFKK
4FTW Chain:A ((67-266))
----------------------------SLVVFLHGYGADGADLLGLAEPLAPHLPGTAFVAPDAPEPCRACGFGFQWFPIPWLDGSSETAAAEGMAAAARDLDAFHDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAPERLAEEARSKPPVLLVHGDADPVVPFADMSLAGEALAEAGFTTYGHVMKGTGHGIAPDGLSVALAFLKERLP-
General information:
TITO was launched using:
RESULT:
Template:
4FTW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149317 for 1649 contacts (-90.6/contact) +
2D Compatibility (PS) -21033 + (NN) -10709 + (LL) 1860
1D Compatibility (HY) -15200 + (ID) 3950
Total energy: -198349.0 ( -120.28 by residue)
QMean score : 0.580
(partial model without unconserved sides chains):
PDB file :
Tito_4FTW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FTW-query.scw
PDB file :
Tito_Scwrl_4FTW.pdb
: