Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSNIPQNAVEVDTLSSIYTYKELSIDKLKHEYEITVGSNYIEQKVNSRLQEIAKNAKLPGFRSGKMPYDLVVTNYKNEALEYVVNSTIDYCSSDLMKKIEVKSHIYPKVDIMSLPNLN--EEGEKSNFVYKLSFESMPEVPVIDLDKINLKKVEARIEEEDIKGFVDSIKTRFPSFVSVDDASYQAKNGDKLVIDFEGRIRNKLFQGGSNKNFKVTLGSGTFINGFENQLTGMKKGETKSFKLKFPEDYQTISLAGQEANFSVRVNDIQVAEDFGGDDEMAKKIGFRD--CSSLKNHAKEVIGGQCEEMRDLLIKKELFDYLDANYSFDLPTDVVRQE-----QQRVERELGSKDDSCK--------EAERRVKLAMLFMKFSTEHKISLTQNDILNVIVNQYISKDVPFDRVFKHFKSDRQFQELVRGQALEHKVTSYIIEKVNKEEQIVSVKELKELFGNI |
| 1T11 Chain:A ((7-378)) | ------------------------TLEGLQRRLNITVPAANIEDAVAAELRNIAKNRRFDGFRKGKVPMKMVAKMYGKAVRQDVL--------GEVMQRHFIEAIVKEKINPAGAPTFAPVEIGEGKDLVFTATFEVYPEVELKGLENIAVEKPAA---DADVAEMLETLRKQQATWKEVDEA---AENGKRVSIDFVGSIDGVEFEGGKAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENLKGKAAKFAIKVNKVEARELPELNDEFVARFGVAEGGVDALKAEVRKNMERELKQAIKARIKEQAIEGLVKENEIQVPSALIDQEINVLRQQAAQRFGGNVEAAAQLPRELFEEQAKRRVVVGLLLGEVIRTHELKADEEKVKALITEMATAY--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T11.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63503 for 2406 contacts (-26.4/contact) +
2D Compatibility (PS) -36726 + (NN) -6950 + (LL) 7372
1D Compatibility (HY) -19600 + (ID) 4850
Total energy: -124257.0 ( -51.64 by residue)
QMean score : 0.426
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