Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLGPIIENWHEWLRCYRSYSSNTLESYMRDLKDFISFLSAHIGEEVNVGSLEKLSVPELRSWFSFRYA-RGINARSNTRALSVIRNFFKYIKNNYEVNNEAVFSLSRPIQRRTLPKALSISDIKTLVDFFLHNYSLQETHSSLSFQYATKKKESVLSTQLYKHCNFSLPGFQCSDTRKLIINKRTLSIKNWIPVLSIGTTEGNTKTSVKEIKLLDLGEPWIIKREIAIIVLLYGTGLRISEALNLKVSDISNES---LIVTGKGDKQRQVFILPVVKMFIQEYVKAC--------------------------PYLSVNNEAQHLFVG-----------VRGKKLGRTYVANRLQKIRRMLNLPEIVSPHAFRHSFATHLLQENVDIRFIQQLLGHSSLETTQVYTHLNYQDVFNMYKNFQQSLEKDKKLKL |
| 2A3V Chain:A ((2-320)) | --GSQFLLSVREFMQT-RYYAKKTIEAYLHWITRYIHFHNKK--------HPSLMGDKEVEEFLTYLAVQGKVATKTQSLALNSLSFLYKEILKT---PLSLEIRFQRSQLERKLPVVLTRDEIRRLLEI-------------------------------------------------------------------------------------------VDPKHQLPIKLLYGSGLRLMECMRLRVQDIDFDYGAIRIWQGKGGKNRTVTLAKELYPHLKEQIALAKRYYDRDLHQKNYGGVWLPTALKEKYPNAPYEFRWHYLFPSFQLSLDPESDVMRRHHMNETVLQKAVRRSAQEAGIEKTVTCHTLRHSFATHLLEVGADIRTVQEQLGHTDVKTTQIYTHSGVLSPLSRL--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A3V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154122 for 1866 contacts (-82.6/contact) +
2D Compatibility (PS) -28278 + (NN) -1741 + (LL) 7880
1D Compatibility (HY) -14800 + (ID) 3500
Total energy: -194561.0 ( -104.27 by residue)
QMean score : 0.483
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