Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNYRFGTKVLIIGSGAAGYAAAIYAARANLEPVVVTGMQPGGQLTITMGVENYPGFV-SIQGPELMKQMRLHVEKVGAEIVNDEIKSVEQLEYSNEYKFRSSGNNDDYYS-NAVIIAAGSQAKWLGLESERKFQGYGVSACATCDGAFFRNKIVAVIGGGNTAVEEAIFLTRFAKEVILIHRRDKLRAEKIMQDRLFANNKIKVIWNHTVEQVLGEE-NPK--KVTGITIKSTKIDEIQELRVNGVFIAIGHAPNTGVFKSFIEMDEQGYIITKPGTTLTSRAGVFAAGDVQDKVYRQAVVAAGTGCMAALDAEKFLECTSK |
| 4JNQ Chain:A ((28-334)) | --------PVIVIGSGPAGYTAAIYAARAMLKPVVIAGLQQGGQLMITTDVENYPGYAEPVQGPWMMEQMARQAENVGAQIVHDIITEVE----TTVRPFRLKGDSGTIYTCDALIIATGAQAKWLGLESEQTFMGGGVSACATCDGFFYRGKDVVVVGGGNTAVEEALYLSHIAKSVTIVHRRDGFRAEKIMQDRLLSRENVSVVWNSVIDEILGTEAR--GATVTGVRLKNIVTGETQERATHGVFIAIGHAPAVSLFEGKLKQKPNGYLWTAPDSTATDVPGIFAAGDVTDDIYRQAVTAAGMGCMAALEAERWLAAQE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JNQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222387 for 2614 contacts (-85.1/contact) +
2D Compatibility (PS) -32608 + (NN) -13553 + (LL) 916
1D Compatibility (HY) -28800 + (ID) 8450
Total energy: -304882.0 ( -116.63 by residue)
QMean score : 0.628
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