Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRLIMNLVTKSAINFTAPAVLPNG-EIVDDFCLSEHIKG-KYAILLFYPLDFTFVCPTELISLNNRISEFAKRDVEVIGISVDSKFSHYQWRKTSVSNGGIGEISYTLVSDIKKSISRDYGVLYDDSIALRATFVIDDKFIVRHQSINDMPLGRNMDEFIRIVDAIKHNEEHGEVCPAGWKKGKPAMQASDEGVTDYLNSYSEEL
2I81 Chain:A ((2-193))
-----PTYVGKEAPFFKAEAVF--GDNSFGEVNLTQ-FIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLFDDSVSLRAFVLIDMNGIVQHLLVNNLAIGRSVDEILRIIDAIQHHEKYGDVCPANWQKGKVSMKPSEEGVAQYLST-----
General information:
TITO was launched using:
RESULT:
Template:
2I81.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121664 for 1420 contacts (-85.7/contact) +
2D Compatibility (PS) -19929 + (NN) -403 + (LL) 676
1D Compatibility (HY) -24400 + (ID) 4900
Total energy: -170620.0 ( -120.15 by residue)
QMean score : 0.484
(partial model without unconserved sides chains):
PDB file :
Tito_2I81.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I81-query.scw
PDB file :
Tito_Scwrl_2I81.pdb
: