Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYVVIINIVLLKVLMVLTITILSGGFSRERKISLMSGKAVKKALDSLSYNAIEIDVNSNTAEKLKKINPDLAFIALHGPYGEDGCIQGLLEILGIKYTHSGVMASAIAMNKAMSKHIFRSLGIDTPKGYIISRGDI--------LKNNIKIDYPYVLKPINEGSSIGVHITFSHEDYLKLKNMFSVIPVHDAGIEEEEPVWITRDLMIIEEYIPGIELHTAVLLDEAAGTMEIRPKNKFYDYKAKYTNGFAEHIFPAEIPDNIYEMTLEH-ALKVHRFLGCKTISRSDFRYNPKDNTLKMLEINTHPGFTELSLVPEIAKLTKGIDFNELVKIIIEDSLQHKKILEIK |
1IOW Chain:A ((1-303)) | --------------MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVDVTQLKSMGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKLLWQGAGLPVAPWVALTRAEFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAEN---ALQDALRLAFQHD---EE----------VLIEKWLSGPEFTVAILGEEILPSIRIQPSGTFYDYEAKFLSDETQYFCPAGL-EASQEANLQALVLKAWTTLGCKGWGRIDVMLD-SDGQFYLLEANTSPGMTSHSLVPMAAR-QAGMSFSQLVVRILELAD--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IOW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131352 for 2505 contacts (-52.4/contact) +
2D Compatibility (PS) -31942 + (NN) -17920 + (LL) 4072
1D Compatibility (HY) -20400 + (ID) 5450
Total energy: -202992.0 ( -81.03 by residue)
QMean score : 0.467
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