Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MISLLLVVLLFFCGDDAFAKQEPRSIAADSHIKVINYNPQAIHKYTGFYGYQSSILFEPGETIQNLSMGDPTGWQLVPQGNRLFIKPIDDIADTNATVITNKRVYYFELHAEEATGLDDPRLAYEVRFLYPLFSSDEIYTTNNGDILEQANPTTIPDINDIEVVKKGINFNYSISHVKG---SQSIIPTKAFDDGRFTYLQFNKVNSDFPAVFMVDSAGYESLVNFRTVD---DYLIIERVGSVFTLRNGSSTVCLFNENMPFAKGKR |
3JQO Chain:B ((17-113)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------FAGAKNYQYV---MSEQPEMRSIQPVHVWDNYRFTRFEFP-ANAELPQVYMISASGKETLPNSHVVGENRNIIEVETVAKEWRIRLGDKVVGVRNNNFAPGRGAV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JQO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46322 for 614 contacts (-75.4/contact) +
2D Compatibility (PS) -9985 + (NN) -4039 + (LL) 10396
1D Compatibility (HY) -5200 + (ID) 1300
Total energy: -56450.0 ( -91.94 by residue)
QMean score : 0.558
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