Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHDKFDNVTFTINGTRESLFNFVFCEDQCTELSVQKTLDYLRARNI--------EATWVMNSHTK-TQGILEKCGIKHVSTPKKVLLNMKNYFLPADVVPGLKLNAVTSSNLLKQLDSYTSKIFHHSIGIV----STFFRGLSNYDDKNSGLRFFLVTL--NDEIIGTCGFYIQDSVAGFYSDGVLPIYRNRGIGTQMVLDRIKIIQQLECKHVVAHCMK----PSVNLYKRLGFQILGNLYLYTSSA
3TT2 Chain:A ((100-315))
----------------------------LGTWLVQWGEEWIQDRMHLAPAEAQVTVQHYIRASSTSALRLMEQHGYRPVRDIWVMAITLDQPPPAPEWPEGITARTFVPGLDERATYEAVEEAFG----RPPSTFERWLSMTQSER-KDPE-LWLLAVETDSGHIVGTCLGQETAGKGWIGSVGVRRPWRGRGIALALLQEVFGVYYRRGVREVELSVDAESRTGAPRLYRRAGMHVKHRYVLHRKEI
General information:
TITO was launched using:
RESULT:
Template:
3TT2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146757 for 1401 contacts (-104.8/contact) +
2D Compatibility (PS) -19937 + (NN) 2308 + (LL) 1860
1D Compatibility (HY) -3600 + (ID) 1350
Total energy: -167476.0 ( -119.54 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_3TT2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TT2-query.scw
PDB file :
Tito_Scwrl_3TT2.pdb
: