Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKSFILSTGSYLPKKKLGNDEIALM-VETSDEWIRQRTGITQRYIADEAEL---TSDLAVNSAKNAIEKAQISVDEIGLIIVATTTPDKTLPSCATIAQNKLKCKNAFSFDVQAACSGFIYAVTIADSLIKSNDRIKYALVIGAEIMSRIVDWKDRSTCVLFGDGAGAVIMKSTAHCNEMTENSTRGIISTNLYSDGNVDVLCTKGGISSTGDSGK-----IYMNGREVFKHAVDKLTASIEETLRCNNLKITDIDWLVPHQANIRIIEAVVKKLNFLMEKVI-NTVDQHANTSAASIPLALDYAIQKPK--IKPGSLGILVAIGAGLTWGSVLLRY |
| 1HNJ Chain:A ((1-317)) | -MYTKIIGTGSYLPEQVRTNADLEKMV-DTSDEWIVTRTGIRERHIAAP---NETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCPAFDVAAACAGFTYALSVADQYVKSGAV-KYALVVGSDVLARTCDPTDRGTIIIFGDGAGAAVLAAS---E------EPGIISTHLHADGSYGELLTLPN---ADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDN-VVVTLDRHGNTSAASVPCALDEAVRD--GRIKPGQLVLLEAFGGGFTWGSALVRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HNJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -253893 for 2880 contacts (-88.2/contact) +
2D Compatibility (PS) -31782 + (NN) -7330 + (LL) 1896
1D Compatibility (HY) -24800 + (ID) 7350
Total energy: -323259.0 ( -112.24 by residue)
QMean score : 0.531
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