Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTPKTFE--GFHIYHYEEVSSTNGKALDLIDRGISNETVIIADKQTEGRGRTGKNWISPEGNFYASFIINLLQITSLGSSITHWDSRLAVAAHLDVIPAHDAKIQCWNDRESLSKLTELTFVTALAVGNTLLSFINDSNVQYKWPNDIFVDGKKISGILLEKKSNSNWLVIGIGINIDHAPLLEATCINKLLSSSVVPVTDTKIQMQVPMSHARMILQNIYILKELVTNFNNLRKQWILDGFCAIREMWLKRAFKMNEQISVKFASKLHEGIFIDIDKGGRLVLQQKDGSLIYFDAGELFVNNIL |
1WNL Chain:A ((1-235)) | MLGLKTSIIGRRVIYFQEITSTNEFAKT---SYLEEGTVIVADKQTMGHGRLNRKWESPEGGLWLSIVLSP--------------------------------------KVPQKDLPKIVFLGAVGVVETLKEF--SIDGRIKWPNDVLVNYKKIAGVLVEGKGD--KIVLGIGLNVNNKVPNGATSMKLELGSEV---------------------PLLSVFRSLITNLDRLYLNFLKNPMDILN--LVRDNMILGVRVKIL-GDGSFEGIAEDIDDFGRLIIRLDSGEVKKVIYGDVSLRFL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128463 for 1905 contacts (-67.4/contact) +
2D Compatibility (PS) -24620 + (NN) -8190 + (LL) 5860
1D Compatibility (HY) -18400 + (ID) 3450
Total energy: -177263.0 ( -93.05 by residue)
QMean score : 0.474
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