Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLNEQPDVLTFLNSNLKGISKFHFGILSKLCGGNKVMDLLFYRPLSYVDRSKS--LLDARVGELTTFIAKIYEHQPP-TFRGRPYKIVVESKSQYIFIVFFNYSIKYLYKLFP--IGANVIISGKLEKFA--EHWQVTHPDYVLLDTNQFEEIARVEPVYQLCRGITNKSIRNIINSNLKE-LPDLPEWIGDTLIKQNKWLSWKESIIKLHRPNSLAEAEICRRRLAYDELFAYQMALKLARENHVRKRGREFTISNKYKEQVLNELSFQLTNDQIRAIDEISERQKSKCRMVSLLQGDVGSGKTVVALFAMLNVIENNMQAALMAPTTILAEQHYNWIEEALSYTDIKIALLTGKTTRKERKIITNELASGILKIIIGTHALFQANVTFKNLGLAVIDEQQRFGVIQRNCLVGKGENADILFVTATPIPRTLQQAIYGDVECSILREKPKSRLPIKTVAMNIKKLVEVIEKLKSAINRGEKAYWICPCIGGNEGLNIAAAEMRFQELQKT-FFNKVGIIHGKLTQVQKDQVMFSFKRNEFPLLVATTVIEVGIDVPDATIMIIENAEQFGLSQLHQLRGRVGRGNKPSFCVLLYNNISKSSFSKLKIMCESQDGFYIAEKDMMLRGSGDILGLKQSGCMEFKFADLYKDRELLNLAYNNTKSAIAENKSFELLLDIFEYRSRLHFSKFQ |
| 1GM5 Chain:A ((110-755)) | ------EVDLSTDIQYAKGVGPNRKKKLKK-LGIETLRDLLEFFPRDYEDRRKIFKLNDLLPGEKVTTQGKIVSVETKKFQNMNILTAVLSDGLVHVPLKWFNQ--DYLQTYLKQLTGKEVFVTGTVKSNAYTGQYEIHNAEVTPK-E--GEYVRRILPIYRLTSGISQKQMRKIFEENIPSLCCSLKETLPERILEKRKLLGVKDAYYGMHFPKTFYHLEKARERLAYEELFVLQLAFQKIRKEREKHGGIPKKIEGKLAEEFIKSLPFKLTNAQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEAGFQTAFMVPTSILAIQHYRRTVESFSKFNIHVALLIGATTPSEKEKIKSGLRNGQIDVVIGTHALIQEDVHFKNLGLVIIDEQHRF-----EALMNKGKMVDTLVMSATPIPRSMALAFYGDLDVTVIDEMPPGRKEVQTMLVPMDRVNEVYEFVRQEVMRGGQAFIVYPLI--------KSAVEMYEYLSKEVF--KLGLMHGRLSQEEKDRVMLEFAEGRYDILVSTTVIEVGIDVPRANVMVIENPERFGLAQLHQLRGRVGRGGQEAYCFLVVGDVGEEAMERLRFFTLNTDGFKIAEYDLKTRGPGE----KQHGLSGFKVADLYRDLKLLEW---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -320676 for 4803 contacts (-66.8/contact) +
2D Compatibility (PS) -65800 + (NN) -10573 + (LL) 4200
1D Compatibility (HY) -49600 + (ID) 11900
Total energy: -454349.0 ( -94.60 by residue)
QMean score : 0.386
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