Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRDNIIIITGITASGKSELCDNLIKKYGNISIVNCDSKQVYKEIPIITAQPPKQEEF---YRLYGCVPAKENYSVGLWLEDLKGEVDHALENARMPIITGGSGLYISSLIN--SLSPIPKVSEEIRKNVSELRKNLSKEEFYKLVLSKDSKIQGKISTNDLHRLSRALEVITATGKSIFVWQESRQLPLFDNFKIYTILPKREDVYRKINSRFVTMIESGAVDEVKKLLNMNLAPHLPAMRAHGVPEIIKYLKGKITLSEAIQIAQTNTRHYAKRQYTWFKNQ-----FPNSEVIDCANKLIEFEIF |
| 2QGN Chain:A ((2-304)) | -KEKLVAIVGPTAVGKTKTSVMLAKRL-NGEVISGDSMQVYRGMDIGTAKITAEEMDGVPHHLIDIKDPSESFSVADFQDLATPLITEIHERGRLPFLVGGTGLYVNAVIHQFNLG---------------------------------------------------------------------ETPSPYNLVMIGLTMERDVLYDRINRRVDQMVEEGLIDEAKKLYDRGIRD-CQSVQAIGYKEMYDYLDGNVTLEEAIDTLKRNSRRYAKRQLTWFRNKANVTWFDMTDV-DFDKKIMEIHNF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QGN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136909 for 1755 contacts (-78.0/contact) +
2D Compatibility (PS) -24101 + (NN) -10802 + (LL) 5476
1D Compatibility (HY) -15200 + (ID) 3750
Total energy: -185286.0 ( -105.58 by residue)
QMean score : 0.574
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