Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAYPDFTLENKLSGVIAGVDEVGRGPLAGPVMSAAVVFTNRNIIIEGINDSKKLTAKNRQVLYEKIISVAKFGIGMASVAEINSYNILQATKLSMERALVNLGIELDYVLVDGNQPPKVKWQVKSIVKGDSLSVSVAAASIVAKVARDQLMQELHNQYPEYNWYKNKGYGTKGHIDAINLYGVTEHHRKSFAPILNSTKRALL
3O3H Chain:A ((11-196))
-------------GIVAGVDEAGRGCLAGPVVAAAVVLEKE---IEGINDSKQLSPAKRERLLDEIMEKAAVGIGIASPEEIDLYNIFNATKLAMNRALENLSVKPSFVLVNG-KGIELSVPGTCLVKGDQKSKLIGAASIVAKVFRDRLMSEFHRMYPQFSFHKHKGYATKEHLNEIRKNGVLPIHRLSFEPVLELLTDDLL
General information:
TITO was launched using:
RESULT:
Template:
3O3H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95145 for 1584 contacts (-60.1/contact) +
2D Compatibility (PS) -20637 + (NN) -11718 + (LL) 1072
1D Compatibility (HY) -17200 + (ID) 4700
Total energy: -148328.0 ( -93.64 by residue)
QMean score : 0.397
(partial model without unconserved sides chains):
PDB file :
Tito_3O3H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O3H-query.scw
PDB file :
Tito_Scwrl_3O3H.pdb
: