Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAYEHKWYIIKVNYGHERNILELVSNAVYFKEVFIPYQTVCNSKSDIKEVCEVYVCMYLCDESRDILSKTLGFHSGDSSNFKIVLDEEVNLKRKEFNKYKWYILRVASNYEEKVCQHVLENSMRLGVNDYFKEVFIPYEELSEVELRSKKAAMRRKCFPGYVFLYVDLCDEVLNFVNNIPKSLKVYGFLKNGSVPKVISDDEIYSMCN--ALYNAQETKK---LSHGYEKGEKVKINDGLFQNFTGKVDMINDEKKIINIEVSILGKPTIIELDLAQVEKIED |
2LQ8 Chain:A ((4-177)) | -------------------------------------------------------------------------------------------------KKKWYIVLTMSGYEEKVKENIEKKVEATGIKNLVGRIVIP--------IRGGQRRKSEKLFPGYVFVEMIMNDEAYNFVRSVPY---VMGFVSSGGQPVPVKDREMRPILRLAGLEEYEEKKKPVKVELGFKVGDMVKIISGPFEDFAGVIKEIDPERQELKVNVTIFGRETPVVLHVSEVEKIE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LQ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115053 for 1204 contacts (-95.6/contact) +
2D Compatibility (PS) -18490 + (NN) -5879 + (LL) 8404
1D Compatibility (HY) -14000 + (ID) 3000
Total energy: -148018.0 ( -122.94 by residue)
QMean score : 0.576
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