Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQDTVLVLQDGKCFLGKSIGKKGKCIGEICFTTGITGYQHTITDPSFADQIIMFTFPHVGNVGINDKDNEGKKIFASGVIMRELSP-ASHPSSYVSLSDWLEKSNLVGISGVDTRALTRHLRKHGPQNGIICPLIHSNVTTVCNTCTYDDQAILVIKGLLDELKKHKPVNGIEITDRVSLNNNF----------------KSDLNAKYKVAVVDFGIKASIVSRLIELDCAIELIKPDRGFAQKILSMCPDGIVLSNGPGDPQEIGKSVTPEIDVIVKSKIPILGICMGHQLLAITLGAKTIKMNVGHRGSNHPVYNVSSDKVEITSQNHGFVFDPSSLPNNVEVTHISMFDNSIEGIMAKDYPVFSVQYHPEEAPGTHDSHYLFRRFIDNIALYKVKSA |
| 1M6V Chain:B ((2-378)) | IKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYLKRHNIVAIADIDTRKLTRLLREKGAQNG-------------CIIAGDNPDAALA----LEKARAFPGLNGMDLAKEVTTAEAYSWTQGSWTLTGGLPQAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTIV-PAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAIT-AIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGHPEASP----AAPLFDHFIELIEQYRKT-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190463 for 3296 contacts (-57.8/contact) +
2D Compatibility (PS) -38916 + (NN) -17104 + (LL) 1428
1D Compatibility (HY) -27200 + (ID) 7650
Total energy: -279905.0 ( -84.92 by residue)
QMean score : 0.528
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