Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSPEFAINALNSLLKSKNEVVAVYTKAPKPSGRGQKLTKSPVHIIAEESGIEVCTPTSLKPLVEQEKFKKFKPDVAVVAAYGLILPKEILNILKYSCINIHPSLLPRWRGAAPIQHTILAGDRKTGISIMQLDGGLDSGPILKQKKFLVEKNDNYKTLHDKLSKLGSNLLMEVIDEIEKHP--PLEQSDDGACYADKI--EDYKIYASDICEVAYRKVKAF--YPKAFVKIEHKRVRILDADFEVDASLTSGQGKIINDN---MHISLKSGTLIPKIVQMEGRNSCNIKDFVRGLKFSMVKKFIE |
| 1FMT Chain:A ((10-300)) | -GTPDFAARHLDALLSSGHNVVGVFTQPDRP------LMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPMSWLEIEGQPVKVWKASV-IDTATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKAMSAQDLLNSRREWFVPGNRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FMT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139853 for 2192 contacts (-63.8/contact) +
2D Compatibility (PS) -29984 + (NN) -14092 + (LL) 224
1D Compatibility (HY) -22000 + (ID) 5250
Total energy: -210955.0 ( -96.24 by residue)
QMean score : 0.590
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