Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKEKLFYTIGEVAEELHLEQHVLRFWESQFRQIKPIKRK-GRRLYDHKCIEVIKKIKYMLYDKGYTIKGVQKEFDNNIKSSCNFGNLLPQLIDLRDYLINKINSEKSNEQL-----------------
2ZHG Chain:A ((10-135))
-----ALLTPGEVAKRSGVAVSALHFYESK-GLITSIRNSGNQRRYKRDVLRYVAIIKIAQ-RIGIPLATIGEAFGVT-LSAKEWKQLSSQWREELDRRIHTLVALRDELDGCIGCGCLSRSDCPLRNP
General information:
TITO was launched using:
RESULT:
Template:
2ZHG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32948 for 655 contacts (-50.3/contact) +
2D Compatibility (PS) -10847 + (NN) -1175 + (LL) 788
1D Compatibility (HY) -4400 + (ID) 1100
Total energy: -49682.0 ( -75.85 by residue)
QMean score : 0.453
(partial model without unconserved sides chains):
PDB file :
Tito_2ZHG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZHG-query.scw
PDB file :
Tito_Scwrl_2ZHG.pdb
: