Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDNVRNFAIIAHIDHGKSTLADRLIEECNGLEAREMTNQVLDSMDIERERGITIKAQTVRLNYTANDGNRYCLNLMDTPGHVDFSYEVSRSLAACEGSLLVIDSSQGVEAQTLANVYKAIDNNHEIIVVLNKVDLPASDPERVKLQVEEIIGIGSSESILISAKTGLGIRDVLEAIITKLPAPQGNINAPLQAILVDSWYDPYLGVVILVRVKNGVLKKGMKIVMMSNNAVYQVDNIGIFTPKKVMTSELSAGEVGFITASMRKMADCKVGDTITEEKKPCGEALPGFKEIHPVVFCSIFPNKTDGFKYLREALEKLHLNDTSFTFEAETSNALGYGFRCGFLGMLHLEVIQERLEREFDLDLTATAPSVIYEVTTQSGETLNIHNPNDMPDSVKIKIVEEPWITATIMVPDQYLGEILSLCDERRGKQEDLSYVGNTMTALLKYKLPLSEVVLDFYDRLKSISKGYASLDWEISNYQESQIDKLSFLVNGEPVDALACIVHKSRSEKRGREICARLRDLIPRQQYKIAIQATVGGKIVARETINPYRKDVTAKLYGGDVTRKMKLLEKQKKGKKRLYSVGNVDIPHNAFIQALKIGD |
3CB4 Chain:A ((1-555)) | MKNIRNFSIIAHI----STLSDRIIQICGG--------------------------QSVTLDYKASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLANCYTAMEMDLEVVPVLNKIDLPAADPERVAEEIEDIVGIDATDAVRCSAKTGVGVQDVLERLVRDIPPPEGDPEGPLQALIIDSWFDNYLGVVSLIRIKNGTLRKGDKVKVMSTGQTYNADRLGIFTPKQVDRTELKCGEVGWLVCAIKDIHGAPVGDTLTLARNPAEKALPGFKKVKPQVYAGLFPVSSDDYEAFRDALGKLSLNDASLFYEPESSSALGFGFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVETTSREVIYVDSPSKLPAVNNIYELREPIAECHMLLPQAYLGNVITLCVEKRGVQTNMVYHGN--QVALTYEIPMAEVVLDFFDRLKSTSRGYASLDYNFKRFQASDMVRVDVLINGERVDALALITHRDNSQNRGRELVEKMKDLIPRQQFDIAIQAAIGTHIIARSTVKQLRKNVLAKCYG----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CB4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -372571 for 4321 contacts (-86.2/contact) +
2D Compatibility (PS) -57818 + (NN) -24928 + (LL) 5072
1D Compatibility (HY) -59200 + (ID) 14050
Total energy: -523495.0 ( -121.15 by residue)
QMean score : 0.549
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