Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFLSVIGIKEPVSNKQLYEHCDIRII-FTKRDVIPVPRHWDPEDSITN-------GHTKQLYNKNWIPVSRTGMTG---------KGFEMTESNTGKLVHDRKLLFISSDIKSFFFAIRIE
2RH4 Chain:A ((78-157))
---------------------CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKH
General information:
TITO was launched using:
RESULT:
Template:
2RH4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4535 for 311 contacts (14.6/contact) +
2D Compatibility (PS) -6051 + (NN) 3103 + (LL) 1600
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -1913.0 ( -6.15 by residue)
QMean score : 0.094
(partial model without unconserved sides chains):
PDB file :
Tito_2RH4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RH4-query.scw
PDB file :
Tito_Scwrl_2RH4.pdb
: