Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNFEQIKKDITENDVVLYMKGTSDFPQCGFSGLVVSILKKLNVKFKYINVLENDEIRQSIKKFSNWPTIPQLYIKGEFIGGCDITREIYEKGELQSLLKEKKIVE
3IPZ Chain:A ((70-172))
-QLKDTLEKLVNSEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFEDVNILENEMLRQGLKEYSNWPTFPQLYIGGEFFGGCDITLEAFKTGELQEEVEKAMCS-
General information:
TITO was launched using:
RESULT:
Template:
3IPZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -72560 for 776 contacts (-93.5/contact) +
2D Compatibility (PS) -11351 + (NN) -6275 + (LL) 400
1D Compatibility (HY) -12400 + (ID) 2750
Total energy: -104936.0 ( -135.23 by residue)
QMean score : 0.762
(partial model without unconserved sides chains):
PDB file :
Tito_3IPZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IPZ-query.scw
PDB file :
Tito_Scwrl_3IPZ.pdb
: