Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLRKNLITSESVAAGHPDKVADQISDAVLDEYLLTDPFSRTAIETLVTKDNVIIAGEVFGPNVANSTIENVVRNTIKDIGYEH--DGFHWGEVGVNMLLHEQSNDIAIGVD------QGAGDQGIMYGYATIETKSLMPAPIFYAHSILKNVMSVVKE---AKLGPDAKSQITLAYESNLPVRAESIIVSIQHPEDLDQLKVKEII-YPYVVSSLPKGWMCAEENFFVNPTGRFVIGGPVSDCGLTGRKIMVDTYGGYIPHGGGAFSGKDATKVDRSAAYMARYLAKNIVFANLAERCLVQLSYAIGVSKPTSFYIDTFGTNKVDEERIKKLIESNIDLSTRGIIKHLSLSRPIYKRTACYGHFGKESEEDDGFSWENLNLSLDLSREFSVQSNRKVSLDC |
| 1P7L Chain:A ((1-382)) | ---AKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTS--AWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGVDRADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPWLRPDAKSQVTFQYDDGKIVGIDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLLHPIYKETAAYGHFGRE-----HFPWEKTDKAQLLRDAAGLK--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P7L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172135 for 3328 contacts (-51.7/contact) +
2D Compatibility (PS) -39474 + (NN) -13690 + (LL) 936
1D Compatibility (HY) -30000 + (ID) 9850
Total energy: -264213.0 ( -79.39 by residue)
QMean score : 0.482
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