Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFAVIETGGKQYLVKKGSVIKVE-KLEAEEGKEVEIDKAVCLS-GN----GLSYLTD--ATVKAEVLEQCRGEKIIIFKKKRRKNYRRKTGHRQYITVLRINEINLQK
3J7Y Chain:S ((95-201))
LFAVVHFASRQWKVTSEDLILIGNELDLACGERIRLEKVLLVGADNFTLLGKPLLGKDLVRVEATVIEKTESWPRIIMRFRKRKNFKKKRIVTTPQTVLRINSIEIAP
General information:
TITO was launched using:
RESULT:
Template:
3J7Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43169 for 585 contacts (-73.8/contact) +
2D Compatibility (PS) -10317 + (NN) 3990 + (LL) 0
1D Compatibility (HY) -9200 + (ID) 1450
Total energy: -60146.0 ( -102.81 by residue)
QMean score : 0.546
(partial model without unconserved sides chains):
PDB file :
Tito_3J7Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J7Y-query.scw
PDB file :
Tito_Scwrl_3J7Y.pdb
: