Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSLKELSLRIKNIRSVQKTTKIMQMVSAAKLLQSQKKLSNSKLYISKLHDIISSIMSSADQELLAKIFTTGDNDSYLVFIIASDRGLCGSFNSSIAKSSQEYVNKLIASSKKVDIVFLGKKAFDIGKNRFDSKSILKIENSKGITLKRVEALVDSMDL----SKYDRIKVFYNKFYNTFTQKPMLETIKPWSKSSSLIDDYLTNSTIDYNYKYEPQNTEFILRSLIQNYVVTALYSALLESAASENSARMAAMESANRNTKEMLNKLALLYNCSRQAAITTDLIEVIGGAESL |
1E79 Chain:G ((1-272)) | -ATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGVGSLALYEK---------------ADIKTPELIIGVSSDRGLCGAIHSSVAKQMKSEAAN----LKEVKIIGVGDKIRSILHRTHSDQFLVTFKEVGRRPPTFGDASVIALELLNSGYEFDEGSIIFNRFRSVISYKTEEKPIFSLDTISSA----------ESMSIYDDIDAD-VLRNYQEYSLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1E79.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39771 for 1940 contacts (-20.5/contact) +
2D Compatibility (PS) -28306 + (NN) -14008 + (LL) 2952
1D Compatibility (HY) -13200 + (ID) 4000
Total energy: -96333.0 ( -49.66 by residue)
QMean score : 0.403
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