Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEQKIQAFEWFRALRDRVVESFLLIEGQSPTDPKIEKRKWDRPGGGGGESTI-IYGDVFEKVGVNISKVYGK-FADSVVNEIPGASESNGEFWASGISLVSHMQSPLVPAAHMNTRLIYTSKQ------WFGGGMDFTPTYKNEEDYKYIHESIKTTCDKFDAEYYLKFKEQCDNYFFLQHRKEPRGIGGIFYDNLNSGRWENDFEFTKAVGETFLKIYLHIIRQHMRKPWTKEQRETQLIKRGRYVEFNLLYDRGTKFGLMTDGNPDAIMMSMPPLVKWM |
| 2QT8 Chain:A ((23-283)) | --------------LQDDICEALEAEDGQA----TFVEDKWTREGGGGGRTRVMVDGAVIEKGGVNFSHVYGKGLPMSSTERHPDIAGCN--FEAMGVSLVIHPKNPHVPTSHANVRLFVAEREGKEPVWWFGGGFDLTPYYAVEEDCRDFHQVAQDLCKPFGADVYARFKGWCDEYFFIPYRNEARGIGGLFFDDLNEWPFEKCFEFVQAVGKGYMDAYIPIVNRRKNTPYTEQQVEFQEFRRGRYAEFNLVIDRGTKFGLQSGGRTESILISLPPRARWG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QT8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106678 for 2052 contacts (-52.0/contact) +
2D Compatibility (PS) -26435 + (NN) -9164 + (LL) 1424
1D Compatibility (HY) -18800 + (ID) 5650
Total energy: -165303.0 ( -80.56 by residue)
QMean score : 0.492
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