Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKRYIDSKKENRVDFILRNHGMSVIIMAVIMFLPPVAISVLYFFDIYDQHTNIEINLLVSTLVTLFIVYNVKHYRYLLNIIEFQNAIFANALNHNTEFCLILHKNEDVVYADARFYERFKDYIDNDVTLGKILEVGDISEKDKKALYQALKNNSSVQVRIVLSKKSRISSFLLLCEPIPDNPQIAINSNKILNLSLAPIARPHGYFVLKATQMNKEQVYEELIEKHNIGTYIANTKGIILSVNKRFLDMFELKKLEKGSSINDFIFQSKYNNVATDNNILFFTVNGVPFKAYMSTAMFCDKHHHSYIYGLITPVESNVIDYQLHPCFANSSIAIAQCDVNGSFIKKNTALIKLAGPDNSSIFT-----LISDDYHMKIREYFLSNRINNASF--DVQLNNNDNMKIYFNKFLH---NRMMFILCYFVDNTEHKNLEIKLEHYQKMQAIGQLAGGIAHDFNNILTGIIGFCDLLLLQHSAGDPSFGDIIQIQQNAKRGSNLVKQLLAFSRRQTMQPKIIDVNSTIANLCEMIKRLIG-ENIKFTTYYGRDLGMVRADQGQLEQVILNLAVNASAAMEKGGELTIRTFNKKIDSLNSTPQGMFSPDKEAIEHGNYVMIEVIDTGCGMVSDTVEKVFDPFFSTKDITSGTGLGLSTVYGIIK-QTEGYIYVASEVNCGTKFSIFLPMVYISDENHREKGSEEIEKPVVNEVKDNGIILLIEDEDSVREFITKALKRKGFDVIEASMGSKALEIISKKNQHIDLIITDVIMPEVSGPEIVKEALIHRPDINVIFISGYTEDAFLKNDNINIEDFHFLPKPFTLSELGNKVQSVLHKAKKAV |
3A0R Chain:A ((9-347)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSESILESLETAIITLSKDGRITEWNKKAEQLFGLKKENVLGRRLKDLPDFEEIGSVAE---SVFENKEPVFLNFYKFGERYFNIRFSPFRNAKTQLLEGVIITIDDVTELYKYEEERKRRERLSILGEMTARVAHEIRNPITIIGGFIMRMKKHLDDPETLKKYINIITNELSRLETIVKEILEYSKERVLEFTEFNLNELIREVYVLFEEKIRKMNIDFCFETDNEDLRVEADRTRIKQVLINLVQNAIEATGENGKIKITSE----------------------DMYTKVRVSVWNSGPPIPEELKEKIFSPFFTT--------LGLSICRKIIEDEHGGKIWTENR-ENGVVFIFEIPKTPEKR---------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A0R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141827 for 2183 contacts (-65.0/contact) +
2D Compatibility (PS) -34236 + (NN) -7825 + (LL) 36464
1D Compatibility (HY) -10800 + (ID) 3550
Total energy: -161774.0 ( -74.11 by residue)
QMean score : 0.265
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