Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNIIHPNLEKSINNWFETQFNSLTLPFYNSIDLRNSGYKIAPIDANLFPAGFNNLSEMSKATTAELMRSYFEGK--QHKRVLIIPENYTRNKMYIENVFAIEVILQQAGFETRIGLFHNEA---YNLI------EPYETIVKENSLLKTTSGFMPDVIILNRDMTSHIPDMLENVKQEIIPSPLYGWHSRQKFKYFKIYKKLVSEFCSEFKIDPWLISAFTEGCDEVDFNDDSPLETVATKVDQVLSLVQKKYEEYGIKTQPYVFIKASNGTYGMGIITATSGEEILTLNKKKRHKMKKIKEGIEVNSVIIQEGVPTIDIFECSPAEPLIYYIGNTPTCYLYRCNSRKDIYSSLNSTNCKFYDVSQVV-EN------------KTLSLWGTVSKLAVLALAVEMRSFHI |
| 3K1T Chain:A ((25-424)) | --------NMPRIEHWFRSQWQEYGAPFYASVDLRNAGFKLAPVDTNLFPGGFNNLNPDFLPLCIQAAMVAVEKICPDARRLLLIPENHTRNTFYLRNVHALTHILRQAGLEVRIGSIAPEITAPTFLETHDGHSILLEPVRRKANRL-ELDNFDSCAILLNNDLSGGIPDILQGLEQSLIPPLHAGWATRRKSNHFTAYDRVVEEFAPLIDIDPWLLNPYFDTCGGLDFHARLGEEQLAEKVDSLLAKIRRKYAEYGVKQEPFVIVKADAGTYGMGIMTVKSADDVRDLNRKQRNKMSVVKEGLKVSEVILQEGVYTFEHLKDAVAEPVIYMMDHFVVGGFYRVHTSRGADENLNAPGMHFEPLTFETPCSTPDCAGAPDAAPNRFYAYGVVARLALLAATIELQETD- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K1T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171653 for 3027 contacts (-56.7/contact) +
2D Compatibility (PS) -40489 + (NN) -18560 + (LL) 748
1D Compatibility (HY) -28800 + (ID) 7050
Total energy: -265804.0 ( -87.81 by residue)
QMean score : 0.482
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