Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNSGQQKFAELEGNRKVLSKRVLRKVEITTVSKGQNNSAASEKNFLRQRANLSKLKKELSKLLVLMIRLKLYRIDKMICERNLINLSNIVNYLCL
3FFZ Chain:A ((717-775))
-----------------------------TIIESKYNSYTLEEKNELTNKYDIKQIENELNQ----KVSIAMNNIDRFLTESSISYLMKIINEVKI
General information:
TITO was launched using:
RESULT:
Template:
3FFZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10387 for 241 contacts (43.1/contact) +
2D Compatibility (PS) -6107 + (NN) -1769 + (LL) 3180
1D Compatibility (HY) -4000 + (ID) 750
Total energy: 941.0 ( 3.90 by residue)
QMean score : 0.304
(partial model without unconserved sides chains):
PDB file :
Tito_3FFZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FFZ-query.scw
PDB file :
Tito_Scwrl_3FFZ.pdb
: